Table 2. General characteristics of the sequence output of the studied strains and reference strain A. baumannii K09-14.
|
Accession No |
Coverage |
Total length (Mb) |
N50 |
GC (%) |
No. of |
No. of Sub-systems |
Total RNA |
MLST type |
No. of IS |
No. of Pathogenicity islands |
Human Pathogen probability |
|
|
SDL03 |
JAMZEM000000000 |
122.4 |
3.92 |
104859 |
39.12 |
3903 |
315 |
51 |
ST1 |
70 |
25 |
0.852 |
|
SDL07 |
JAMOLG000000000 |
32.36 |
3.91 |
78650 |
39.12 |
4025 |
316 |
49 |
ST1 |
69 |
22 |
0.861 |
|
SDL32 |
JAMOLH000000000 |
88.80 |
3.98 |
72775 |
38.83 |
4137 |
307 |
51 |
ST2 |
31 |
25 |
0.851 |
|
SDL35 |
JAMOLI000000000 |
85.17 |
3.86 |
114833 |
39.00 |
3854 |
313 |
53 |
ST164 |
39 |
15 |
0.851 |
|
SDL40 |
JAMOLJ000000000 |
97.01 |
3.99 |
64518 |
38.91 |
4070 |
315 |
54 |
ST623 |
43 |
21 |
0.852 |
|
K09-14 |
NZ_CP043953.1 |
N/A |
3.98 |
N/A |
38.98 |
3592 |
310 |
94 |
ST46 |
02 |
18 |
0.857 |