Table 3. Variant calling of BRCA1/2 in OC48 samples.
ACMG Pathogenicity |
Gene |
Consequence |
NT Change |
AA Change (Single) |
Chr |
Start Position |
Fraction |
Depth |
Exon |
dbSNP ID |
Pathogenic |
BRCA1 |
stop_gained |
c.928C>T |
p.Q310* |
chr17 |
41246620 |
56.15 |
1560 |
10/23 |
rs397509338 |
Uncertain significance |
BRCA1 |
missense_variant |
c.2566T>C |
p.Y856H |
chr17 |
41244982 |
54.15 |
772 |
10/23 |
rs80356892 |
Benign |
BRCA2 |
missense_variant |
c.1114A>C |
p.N372H |
chr13 |
32906729 |
41.41 |
3110 |
10/27 |
rs144848 |
Benign |
BRCA2 |
synonymous_variant |
c.4563A>G |
p.L1521L |
chr13 |
32913055 |
99.65 |
1435 |
11/27 |
rs206075 |
Benign |
BRCA2 |
synonymous_variant |
c.6513G>C |
p.V2171V |
chr13 |
32915005 |
100 |
1467 |
11/27 |
rs206076 |
Benign |
BRCA2 |
missense_variant |
c.7397T>C |
p.V2466A |
chr13 |
32929387 |
99.87 |
2227 |
14/27 |
rs169547 |