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Table 4. ADMET analysis of top 3 compounds.

Parameters

Most probable inhibitors

Lupeol

α-amyrin

Luteolin

Physicochemical properties

 

MW       

HBA

HBD      

MR        

TPSA

426.72 g/mol (Dalton)

1

1

135.14

20.23 Ų

426.72 g/mol (Dalton)

1

1

135.14

20.23 Ų

286.24 g/mol (Dalton)

6

4

76.01

111.13 Ų

Lipophilicity

 

iLOGP

XLOGP3

WLOGP 

MLOGP 

Silicos-IT Log P

4.89

9.87

8.02

6.92

6.82

4.77

9.01

8.02

6.92

6.52

1.86

2.53

2.28

-0.03

2.03

Water Solubility

 

ESOL Log S          

ESOL Solubility (mg/ml; mol/l)

ESOL Class           

Silicos-IT LogSw  

Silicos-IT Solubility-(mg/ml) (mol/l)    

-8.64

9.83e-07 mg/ml; 2.30e-09 mol/l

Poorly soluble

-6.74

7.69e-05 mg/ml; 1.80e-07 mol/l

-8.16

2.94e-06 mg/ml; 6.89e-09 mol/l

Poorly soluble

-6.71

8.23e-05 mg/ml; 1.93e-07 mol/l

-3.71

5.63e-02 mg/ml; 1.97e-04 mol/l

Soluble

-3.82

4.29e-02 mg/ml; 1.50e-04 mol/l

Pharmacokinetics properties

 

GI absorption        

BBB permeant

Pgp substrate         

CYP1A2 inhibitor 

CYP2C19 inhibitor

CYP2C9 inhibitor 

CYP2D6 inhibitor 

CYP3A4 inhibitor 

log Kp (cm/s) skin permeation

Low

No

No

No

No

No

No

No

-1.90 cm/s

Low

No

No

No

No

No

No

No

-2.51 cm/s

High

No

No

Yes

No

No

Yes

Yes

-6.25 cm/s

Drug likeness activity

 

Lipinski #violations             

Veber #violations  

Bioavailability score

Yes; 1 violation: MLOGP>4.15

Yes

0.55

Yes; 1 violation: MLOGP>4.15

Yes

0.55

Yes; 0 violation

Yes

0.55

Medicinal chemistry

 

PAINS #alerts       

Lead likeness #violations

 

Synthetic Accessibility

0 alert

No; 2 violations: MW>350, XLOGP3>3.5

5.49

0 alert

No; 2 violations: MW>350, XLOGP3>3.5

6.17

1 alert: catechol A

Yes

 

3.02

Toxicity

hERG inhibition

TA100 10RLI (in vitro Ames test result in TA100 strain-metabolic activation by rat liver homogenate)

Low risk

Negative

Low risk

Negative

Low risk

Negative